Basic Information
Locus ID:
AH06.1496
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Protein of unknown function (DUF563)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH06 | 23363191 | 23369197 | + | AH06.1496 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.73 | 65,780.78 Da | 56.49 | 69.78 | -0.50 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | mobidb-lite | consensus disorder prediction | 295 | 336 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 492 | 506 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 507 | 529 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 306 | 327 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 107 | 122 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 107 | 126 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 489 | 529 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G18170.1 | Glycosyltransferase family 61 protein. | 1.36E-18 |
| RefSeq | XP_044434719.1 | alpha-1,3-arabinosyltransferase XAT2-like [Triticum aestivum] | 8.53E-68 |
| Q6ZFR0 | Alpha-1,3-arabinosyltransferase XAT2 OS=Oryza sativa subsp. japonica OX=39947 GN=XAT2 PE=1 SV=1 | 2.59E-22 | |
| TrEMBL | A0A8T0TRB3 | Glycosyltransferase OS=Panicum virgatum OX=38727 GN=PVAP13_4KG105400 PE=4 SV=1 | 8.96E-70 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 23 | AH03.1339, AH04.1181, AH05.1634, AH05.2682, AH05.3161 ... |
| Poaceae | Oryza coarctata | 1 | Oco01G029890 |
| Poaceae | Oryza sativa | 1 | LOC_Os02g25690.1 |