Basic Information
Locus ID:
AH06.1477
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Flavin containing amine oxidoreductase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH06 | 22673111 | 22679431 | + | AH06.1477 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.11 | 109,730.77 Da | 54.67 | 66.80 | -0.52 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01593 | Flavin containing amine oxidoreductase | 413 | 475 | 8.3E-7 | IPR002937 |
| SUPERFAMILY | SSF51905 | FAD/NAD(P)-binding domain | 410 | 501 | 1.68E-7 | IPR036188 |
| Gene3D | G3DSA:3.50.50.60 | - | 406 | 484 | 9.5E-8 | IPR036188 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 337 | 364 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 750 | 764 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 337 | 354 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 580 | 605 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 749 | 796 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 265 | 284 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 772 | 796 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G13682.1 | LSD1-like2. Encodes a homolog of human Lysine-Specific Demethylase1. Involved in H3K4 methylation of target genes including the flowering loci FLC and FWA. | 3.82E-28 |
| RefSeq | XP_039781338.1 | uncharacterized protein LOC120648720 [Panicum virgatum] | 2.36E-97 |
| Q6YYZ1 | Lysine-specific histone demethylase 1 homolog 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os08g0143400 PE=2 SV=1 | 4.11E-38 | |
| TrEMBL | A0A8T0RG34 | PIPK domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_6KG367606 PE=4 SV=1 | 4.01E-50 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||