Basic Information
Locus ID:
AH06.1301
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Heat shock protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH06 | 17629677 | 17634919 | + | AH06.1301 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.76 | 37,227.99 Da | 49.73 | 75.74 | -0.41 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16927 | HATPase_Hsp90-like | 190 | 330 | 1.06331E-76 | - |
| Pfam | PF02518 | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase | 206 | 329 | 1.2E-9 | IPR003594 |
| Pfam | PF04827 | Plant transposon protein | 72 | 102 | 3.5E-6 | IPR006912 |
| SUPERFAMILY | SSF55874 | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 190 | 330 | 6.95E-45 | IPR036890 |
| Gene3D | G3DSA:3.30.565.10 | - | 190 | 331 | 5.1E-57 | IPR036890 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 241 | 258 | 5.5E-39 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 223 | 240 | 5.5E-39 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 318 | 331 | 5.5E-39 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 266 | 288 | 5.5E-39 | IPR020575 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 23 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Pathway:
ko04141 (Protein processing in endoplasmic reticulum)
map04141 (Protein processing in endoplasmic reticulum)
ko04151 (PI3K-Akt signaling pathway)
map04151 (PI3K-Akt signaling pathway)
map04217 (Necroptosis)
ko04612 (Antigen processing and presentation)
map04612 (Antigen processing and presentation)
map04621 (NOD-like receptor signaling pathway)
ko04626 (Plant-pathogen interaction)
map04626 (Plant-pathogen interaction)
map04657 (IL-17 signaling pathway)
map04659 (Th17 cell differentiation)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G56030.2 | heat shock protein 81-2. A member of heat shock protein 90 (HSP90) gene family. Expressed in all tissues and abundant in root apical meristem, pollen and tapetum. Expression is NOT heat-induced but induced by IAA and NaCl. Interacts with HsfA1d in the cytosol and the nucleus and negatively regulates HsfA1d. Did not bind to AtHsfA4c. | 3.69E-79 |
| RefSeq | XP_002460433.1 | heat shock protein 81-2 [Sorghum bicolor] | 3.65E-82 |
| A2YWQ1 | Heat shock protein 81-1 OS=Oryza sativa subsp. indica OX=39946 GN=HSP81-1 PE=2 SV=1 | 5.87E-83 | |
| TrEMBL | B8BBE9 | HATPase_c domain-containing protein OS=Oryza sativa subsp. indica OX=39946 GN=OsI_28083 PE=3 SV=1 | 1.73E-86 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology