Basic Information
Locus ID:
AH06.1297
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Sodium hydrogen exchanger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH06 | 17529267 | 17532242 | + | AH06.1297 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.50 | 59,821.36 Da | 34.69 | 108.09 | 0.56 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00999 | Sodium/hydrogen exchanger family | 29 | 461 | 2.9E-54 | IPR006153 |
| Gene3D | G3DSA:6.10.140.1330 | - | 147 | 199 | 6.2E-15 | - |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 155 | 165 | 2.0E-9 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 100 | 114 | 2.0E-9 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 86 | 97 | 2.0E-9 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 115 | 123 | 2.0E-9 | IPR004709 |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G55470.1 | Na+/H+ (sodium hydrogen) exchanger 3. member of Sodium proton exchanger family | 1.26E-233 |
| RefSeq | XP_004965335.1 | sodium/hydrogen exchanger 4 [Setaria italica] | 0 |
| Q8S397 | Sodium/hydrogen exchanger 4 OS=Arabidopsis thaliana OX=3702 GN=NHX4 PE=2 SV=2 | 1.21E-232 | |
| TrEMBL | A0A4U6V342 | Na_H_Exchanger domain-containing protein OS=Setaria viridis OX=4556 GN=SEVIR_4G177000v2 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology