Basic Information
Locus ID:
AH06.1145
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH06 | 13630955 | 13634625 | + | AH06.1145 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.32 | 82,857.25 Da | 44.07 | 92.20 | -0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 172 | 211 | 1.6E-11 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 445 | 710 | 3.1E-41 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 280 | 322 | 2.6E-6 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 173 | 336 | 2.08E-38 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 422 | 714 | 4.15E-74 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 171 | 353 | 1.3E-54 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 521 | 733 | 7.3E-60 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 413 | 520 | 1.9E-37 | - |
| SMART | SM00220 | serkin_6 | 444 | 713 | 7.4E-33 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 444 | 734 | 34.887672 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 563 | 575 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 450 | 472 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G16000.1 | NSP-interacting kinase 1. NSP-interacting kinase (NIK1), receptor-like kinase, involved in defense response against geminivirus It acts as a virulence target of the begomovirus nuclear shuttle protein (NSP). | 1.43E-262 |
| RefSeq | XP_039843404.1 | LRR receptor kinase SERL2-like isoform X2 [Panicum virgatum] | 0 |
| Q9FP13 | LRR receptor kinase SERL2 OS=Oryza sativa subsp. japonica OX=39947 GN=SERL2 PE=1 SV=1 | 3.14E-300 | |
| TrEMBL | A0A8T0TKL9 | Protein kinase domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_4KG163300 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology