Basic Information
Locus ID:
AH05.917
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Calcium-binding EGF-like domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH05 | 8288959 | 8292244 | + | AH05.917 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.85 | 39,570.87 Da | 48.98 | 75.28 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00054 | EGF_CA | 245 | 287 | 7.53345E-5 | - |
| SUPERFAMILY | SSF57196 | EGF/Laminin | 260 | 289 | 9.82E-5 | - |
| Gene3D | G3DSA:2.10.25.10 | Laminin | 244 | 295 | 1.8E-7 | - |
| SMART | SM00179 | egfca_6 | 244 | 294 | 1.2E-6 | IPR001881 |
| SMART | SM00181 | egf_5 | 247 | 294 | 0.009 | IPR000742 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 30 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 17 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G21210.1 | wall associated kinase 4. cell wall-associated ser/thr kinase involved in cell elongation and lateral root development | 8.7E-12 |
| RefSeq | XP_015613284.1 | wall-associated receptor kinase 1 [Oryza sativa Japonica Group] | 1.8E-103 |
| Q9LMN6 | Wall-associated receptor kinase 4 OS=Arabidopsis thaliana OX=3702 GN=WAK4 PE=2 SV=1 | 8.65E-11 | |
| TrEMBL | A0A5S6RA42 | Protein kinase domain containing protein OS=Oryza sativa subsp. japonica OX=39947 GN=LOC_Os10g02720 PE=4 SV=1 | 4.07E-102 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology