Basic Information
Locus ID:
AH05.592
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
DNA (cytosine-5-)-methyltransferase activity
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH05 | 5275696 | 5284169 | + | AH05.592 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.76 | 145,926.63 Da | 49.23 | 73.23 | -0.42 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18635 | CD_CMT3_like | 882 | 938 | 4.28915E-32 | - |
| Pfam | PF01426 | BAH domain | 625 | 738 | 1.2E-9 | IPR001025 |
| Pfam | PF00385 | Chromo (CHRromatin Organisation MOdifier) domain | 885 | 936 | 1.6E-8 | IPR023780 |
| Pfam | PF00145 | C-5 cytosine-specific DNA methylase | 944 | 1307 | 4.2E-36 | IPR001525 |
| SUPERFAMILY | SSF53335 | S-adenosyl-L-methionine-dependent methyltransferases | 778 | 1308 | 3.97E-76 | IPR029063 |
| SUPERFAMILY | SSF54160 | Chromo domain-like | 869 | 940 | 1.1E-13 | IPR016197 |
| Gene3D | G3DSA:2.30.30.490 | - | 558 | 726 | 2.0E-46 | IPR043151 |
| Gene3D | G3DSA:3.90.120.10 | DNA Methylase, subunit A, domain 2 | 1101 | 1274 | 1.6E-217 | - |
| Gene3D | G3DSA:3.40.50.150 | Vaccinia Virus protein VP39 | 781 | 1325 | 1.6E-217 | - |
| SMART | SM00298 | chromo_7 | 882 | 941 | 2.6E-7 | IPR000953 |
| SMART | SM00439 | BAH_4 | 624 | 741 | 9.7E-17 | IPR001025 |
| ProSiteProfiles | PS50013 | Chromo and chromo shadow domain profile. | 883 | 936 | 11.109501 | IPR000953 |
| ProSiteProfiles | PS51038 | BAH domain profile. | 624 | 741 | 18.167778 | IPR001025 |
| ProSiteProfiles | PS51679 | C-5 cytosine-specific DNA methylase (Dnmt) domain profile. | 779 | 1315 | 46.45163 | IPR001525 |
| ProSitePatterns | PS00094 | C-5 cytosine-specific DNA methylases active site. | 953 | 965 | - | IPR018117 |
| ProSitePatterns | PS00598 | Chromo domain signature. | 906 | 926 | - | IPR023779 |
| ProSitePatterns | PS00095 | C-5 cytosine-specific DNA methylases C-terminal signature. | 1290 | 1308 | - | IPR031303 |
| PRINTS | PR00105 | Cytosine-specific DNA methyltransferase signature | 1042 | 1055 | 1.7E-11 | IPR001525 |
| PRINTS | PR00105 | Cytosine-specific DNA methyltransferase signature | 780 | 796 | 1.7E-11 | IPR001525 |
| PRINTS | PR00105 | Cytosine-specific DNA methyltransferase signature | 996 | 1010 | 1.7E-11 | IPR001525 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 111 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 494 | 521 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 53 | 87 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 128 | 169 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 14 | 31 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 194 | 297 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 283 | 297 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Pathway:
Module:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G19020.2 | - | 5.6E-272 |
| RefSeq | XP_025806233.1 | DNA (cytosine-5)-methyltransferase CMT2-like isoform X1 [Panicum hallii] | 0 |
| Q5KQL9 | DNA (cytosine-5)-methyltransferase CMT2 OS=Oryza sativa subsp. japonica OX=39947 GN=CMT2 PE=2 SV=2 | 0 | |
| TrEMBL | A0A2S3H701 | DNA (cytosine-5-)-methyltransferase OS=Panicum hallii OX=206008 GN=PAHAL_3G074800 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology