Basic Information
Locus ID:
AH05.525
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH05 | 4665825 | 4668327 | + | AH05.525 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.04 | 82,865.53 Da | 33.67 | 73.47 | -0.37 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07676 | WD40-like Beta Propeller Repeat | 562 | 580 | 0.01 | IPR011659 |
| Pfam | PF07676 | WD40-like Beta Propeller Repeat | 493 | 533 | 7.3E-7 | IPR011659 |
| SUPERFAMILY | SSF82171 | DPP6 N-terminal domain-like | 145 | 669 | 1.7E-26 | - |
| Gene3D | G3DSA:2.120.10.30 | - | 141 | 373 | 4.2E-10 | IPR011042 |
| Gene3D | G3DSA:2.120.10.30 | - | 467 | 701 | 3.8E-25 | IPR011042 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G21680.1 | DPP6 N-terminal domain-like protein. | 4.8E-103 |
| RefSeq | XP_039798722.1 | uncharacterized protein LOC120663845 [Panicum virgatum] | 0 |
| TrEMBL | A0A1E5WKQ0 | Protein TolB OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0000999 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology