Basic Information
Locus ID:
AH05.524
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
von Willebrand factor type A domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH05 | 4615514 | 4617230 | - | AH05.524 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.29 | 55,909.57 Da | 33.00 | 88.51 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00092 | von Willebrand factor type A domain | 60 | 218 | 2.0E-21 | IPR002035 |
| Pfam | PF14624 | VWA / Hh protein intein-like | 402 | 470 | 2.2E-12 | IPR032838 |
| SUPERFAMILY | SSF53300 | vWA-like | 57 | 216 | 7.12E-28 | IPR036465 |
| Gene3D | G3DSA:3.40.50.410 | von Willebrand factor, type A domain | 60 | 229 | 4.6E-36 | IPR036465 |
| SMART | SM00327 | VWA_4 | 58 | 228 | 9.9E-21 | IPR002035 |
| ProSiteProfiles | PS50234 | VWFA domain profile. | 60 | 231 | 18.670683 | IPR002035 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G60710.1 | Zinc finger (C3HC4-type RING finger) family protein. | 6.54E-42 |
| RefSeq | XP_039798718.1 | E3 ubiquitin-protein ligase WAV3-like [Panicum virgatum] | 6.43E-233 |
| TrEMBL | A0A8T0TZN3 | VWFA domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_3NG054000 PE=4 SV=1 | 1.45E-231 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology