Basic Information
Locus ID:
AH05.523
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
WD40-like Beta Propeller Repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH05 | 4602832 | 4605510 | + | AH05.523 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.59 | 70,846.73 Da | 39.32 | 70.72 | -0.40 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07676 | WD40-like Beta Propeller Repeat | 579 | 607 | 0.014 | IPR011659 |
| SUPERFAMILY | SSF82171 | DPP6 N-terminal domain-like | 181 | 624 | 2.79E-22 | - |
| Gene3D | G3DSA:2.120.10.30 | - | 172 | 375 | 1.2E-12 | IPR011042 |
| Gene3D | G3DSA:2.120.10.30 | - | 423 | 620 | 1.6E-17 | IPR011042 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_025809293.1 | uncharacterized protein LOC112887363 [Panicum hallii] | 0 |
| TrEMBL | A0A3L6T1X2 | Peptidase_S9 domain-containing protein OS=Panicum miliaceum OX=4540 GN=C2845_PM05G08240 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology