Basic Information
Locus ID:
AH05.521
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
von Willebrand factor type A domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH05 | 4590595 | 4592320 | - | AH05.521 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.23 | 56,877.30 Da | 36.85 | 84.97 | -0.31 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF14624 | VWA / Hh protein intein-like | 405 | 476 | 1.2E-14 | IPR032838 |
| Pfam | PF00092 | von Willebrand factor type A domain | 59 | 218 | 1.3E-20 | IPR002035 |
| SUPERFAMILY | SSF53300 | vWA-like | 56 | 224 | 3.01E-27 | IPR036465 |
| Gene3D | G3DSA:3.40.50.410 | von Willebrand factor, type A domain | 59 | 227 | 9.8E-37 | IPR036465 |
| SMART | SM00327 | VWA_4 | 57 | 226 | 1.2E-20 | IPR002035 |
| ProSiteProfiles | PS50234 | VWFA domain profile. | 59 | 229 | 17.754938 | IPR002035 |
| Coils | Coil | Coil | 410 | 430 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G08050.1 | Zinc finger (C3HC4-type RING finger) family protein. | 6.62E-43 |
| RefSeq | XP_039798713.1 | E3 ubiquitin-protein ligase WAV3-like [Panicum virgatum] | 1.69E-280 |
| Q55874 | Uncharacterized protein sll0103 OS=Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa) OX=1111708 GN=sll0103 PE=4 SV=1 | 7.91E-12 | |
| TrEMBL | A0A3L6RAZ4 | VWFA domain-containing protein OS=Panicum miliaceum OX=4540 GN=C2845_PM06G11250 PE=4 SV=1 | 4.24E-283 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology