Basic Information
Locus ID:
AH05.4171
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Thaumatin family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH05 | 58951034 | 58951546 | - | AH05.4171 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.59 | 16,955.73 Da | 42.26 | 63.23 | 0.21 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09217 | TLP-P | 24 | 170 | 2.85051E-73 | - |
| Pfam | PF00314 | Thaumatin family | 28 | 130 | 2.3E-32 | IPR001938 |
| SUPERFAMILY | SSF49870 | Osmotin, thaumatin-like protein | 21 | 170 | 3.14E-54 | IPR037176 |
| Gene3D | G3DSA:2.60.110.10 | Thaumatin | 22 | 170 | 1.9E-50 | IPR037176 |
| SMART | SM00205 | tha2 | 24 | 170 | 1.4E-37 | IPR001938 |
| PIRSF | PIRSF002703 | PR5 | 1 | 144 | 1.6E-43 | IPR001938 |
| PIRSF | PIRSF002703 | PR5 | 140 | 170 | 0.012 | IPR001938 |
| ProSiteProfiles | PS51367 | Thaumatin family profile. | 21 | 170 | 35.078171 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 77 | 106 | 2.3E-43 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 23 | 35 | 2.3E-43 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 160 | 169 | 2.3E-43 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 112 | 128 | 2.3E-43 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 43 | 52 | 2.3E-43 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 65 | 76 | 2.3E-43 | IPR001938 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G11650.1 | osmotin 34. osmotin-like protein | 1.1E-32 |
| RefSeq | XP_039793781.1 | thaumatin-like pathogenesis-related protein 3 [Panicum virgatum] | 4.47E-102 |
| P31110 | Thaumatin-like protein OS=Oryza sativa subsp. japonica OX=39947 GN=Os12g0628600 PE=1 SV=1 | 1.56E-85 | |
| TrEMBL | A0A811R9K3 | Thaumatin-like protein OS=Miscanthus lutarioriparius OX=422564 GN=NCGR_LOCUS50025 PE=4 SV=1 | 1.62E-104 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology