Basic Information
Locus ID:
AH05.417
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Translocase of chloroplast 159/132, membrane anchor domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH05 | 3640383 | 3643338 | + | AH05.417 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.08 | 85,573.67 Da | 42.05 | 85.75 | -0.42 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF04548 | AIG1 family | 153 | 291 | 2.7E-22 | IPR006703 |
| Pfam | PF11886 | Translocase of chloroplast 159/132, membrane anchor domain | 490 | 752 | 3.4E-113 | IPR024283 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 148 | 287 | 3.4E-19 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 135 | 378 | 7.3E-50 | IPR027417 |
| ProSiteProfiles | PS51720 | AIG1-type G domain profile. | 150 | 380 | 28.250767 | IPR006703 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 395 | 417 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G20300.1 | Avirulence induced gene (AIG1) family protein. | 3.43E-207 |
| RefSeq | XP_034602712.1 | translocase of chloroplast 90, chloroplastic [Setaria viridis] | 0 |
| Q6S5G3 | Translocase of chloroplast 90, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TOC90 PE=1 SV=1 | 3.3E-206 | |
| TrEMBL | A0A4U6TVI3 | AIG1-type G domain-containing protein OS=Setaria viridis OX=4556 GN=SEVIR_7G287600v2 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology