Basic Information
Locus ID:
AH05.4166
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
thaumatin-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH05 | 58918234 | 58918749 | - | AH05.4166 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.88 | 17,292.16 Da | 40.31 | 61.70 | 0.26 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09217 | TLP-P | 24 | 171 | 1.88344E-76 | - |
| Pfam | PF00314 | Thaumatin family | 28 | 130 | 6.3E-33 | IPR001938 |
| SUPERFAMILY | SSF49870 | Osmotin, thaumatin-like protein | 21 | 171 | 5.62E-55 | IPR037176 |
| Gene3D | G3DSA:2.60.110.10 | Thaumatin | 22 | 140 | 3.1E-44 | IPR037176 |
| Gene3D | G3DSA:2.60.110.10 | Thaumatin | 141 | 171 | 1.1E-6 | IPR037176 |
| SMART | SM00205 | tha2 | 24 | 171 | 1.6E-43 | IPR001938 |
| PIRSF | PIRSF002703 | PR5 | 1 | 143 | 9.6E-44 | IPR001938 |
| PIRSF | PIRSF002703 | PR5 | 138 | 171 | 1.9E-4 | IPR001938 |
| ProSiteProfiles | PS51367 | Thaumatin family profile. | 21 | 171 | 35.725876 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 161 | 170 | 1.5E-44 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 65 | 76 | 1.5E-44 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 43 | 52 | 1.5E-44 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 112 | 128 | 1.5E-44 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 77 | 106 | 1.5E-44 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 23 | 35 | 1.5E-44 | IPR001938 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G11650.1 | osmotin 34. osmotin-like protein | 6.59E-35 |
| RefSeq | XP_034584824.1 | thaumatin-like protein [Setaria viridis] | 3.99E-103 |
| P31110 | Thaumatin-like protein OS=Oryza sativa subsp. japonica OX=39947 GN=Os12g0628600 PE=1 SV=1 | 6.8E-94 | |
| TrEMBL | A0A835FKL2 | Thaumatin-like protein OS=Digitaria exilis OX=1010633 GN=HU200_008874 PE=4 SV=1 | 3.23E-100 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology