Basic Information
Locus ID:
AH05.4165
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Thaumatin family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH05 | 58914999 | 58915510 | + | AH05.4165 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.77 | 16,636.34 Da | 39.99 | 57.96 | 0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00314 | Thaumatin family | 52 | 135 | 7.1E-25 | IPR001938 |
| SUPERFAMILY | SSF49870 | Osmotin, thaumatin-like protein | 25 | 161 | 8.63E-44 | IPR037176 |
| Gene3D | G3DSA:2.60.110.10 | Thaumatin | 25 | 134 | 4.7E-33 | IPR037176 |
| Gene3D | G3DSA:2.60.110.10 | Thaumatin | 135 | 162 | 3.0E-6 | IPR037176 |
| SMART | SM00205 | tha2 | 28 | 162 | 2.8E-18 | IPR001938 |
| PIRSF | PIRSF002703 | PR5 | 43 | 136 | 3.2E-28 | IPR001938 |
| PIRSF | PIRSF002703 | PR5 | 132 | 162 | 0.0014 | IPR001938 |
| PIRSF | PIRSF002703 | PR5 | 1 | 49 | 7.0E-6 | IPR001938 |
| ProSiteProfiles | PS51367 | Thaumatin family profile. | 45 | 162 | 25.91715 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 152 | 161 | 2.4E-5 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 27 | 39 | 2.4E-5 | IPR001938 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G75030.1 | thaumatin-like protein 3. encodes a PR5-like protein | 1.96E-27 |
| RefSeq | XP_039802982.1 | thaumatin-like pathogenesis-related protein 3 [Panicum virgatum] | 1.47E-81 |
| P50695 | Thaumatin-like pathogenesis-related protein 1 OS=Avena sativa OX=4498 GN=RASTL-1 PE=2 SV=1 | 3.06E-65 | |
| TrEMBL | A0A1E5WG20 | Thaumatin-like protein OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0002686 PE=4 SV=1 | 1.66E-86 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology