Basic Information
Locus ID:
AH05.4164
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Thaumatin family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH05 | 58910832 | 58911350 | - | AH05.4164 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.52 | 17,509.19 Da | 28.95 | 60.81 | 0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09217 | TLP-P | 27 | 171 | 8.17737E-70 | - |
| Pfam | PF00314 | Thaumatin family | 30 | 145 | 1.4E-33 | IPR001938 |
| SUPERFAMILY | SSF49870 | Osmotin, thaumatin-like protein | 23 | 171 | 2.35E-52 | IPR037176 |
| Gene3D | G3DSA:2.60.110.10 | Thaumatin | 24 | 144 | 6.8E-45 | IPR037176 |
| Gene3D | G3DSA:2.60.110.10 | Thaumatin | 145 | 172 | 1.1E-5 | IPR037176 |
| SMART | SM00205 | tha2 | 26 | 172 | 9.0E-37 | IPR001938 |
| PIRSF | PIRSF002703 | PR5 | 1 | 148 | 1.3E-44 | IPR001938 |
| PIRSF | PIRSF002703 | PR5 | 142 | 172 | 0.0035 | IPR001938 |
| ProSiteProfiles | PS51367 | Thaumatin family profile. | 23 | 172 | 34.411064 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 45 | 54 | 7.8E-44 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 78 | 107 | 7.8E-44 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 162 | 171 | 7.8E-44 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 25 | 37 | 7.8E-44 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 113 | 129 | 7.8E-44 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 66 | 77 | 7.8E-44 | IPR001938 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G11650.1 | osmotin 34. osmotin-like protein | 1.55E-36 |
| RefSeq | XP_025805003.1 | thaumatin-like pathogenesis-related protein 3 [Panicum hallii] | 3.04E-110 |
| P50698 | Thaumatin-like pathogenesis-related protein 4 OS=Avena sativa OX=4498 GN=RASTL-4 PE=2 SV=1 | 2.48E-83 | |
| TrEMBL | A0A1E5WG20 | Thaumatin-like protein OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0002686 PE=4 SV=1 | 8.44E-119 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology