Basic Information
Locus ID:
AH05.4161
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Thaumatin family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH05 | 58887760 | 58888287 | + | AH05.4161 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 11.07 | 18,551.94 Da | 51.93 | 71.49 | -0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00314 | Thaumatin family | 30 | 80 | 6.1E-10 | IPR001938 |
| SUPERFAMILY | SSF49870 | Osmotin, thaumatin-like protein | 23 | 175 | 1.57E-31 | IPR037176 |
| Gene3D | G3DSA:2.60.110.10 | Thaumatin | 24 | 114 | 5.1E-19 | IPR037176 |
| Gene3D | G3DSA:2.60.110.10 | Thaumatin | 118 | 175 | 5.8E-8 | IPR037176 |
| SMART | SM00205 | tha2 | 26 | 175 | 3.2E-14 | IPR001938 |
| PIRSF | PIRSF002703 | PR5 | 142 | 175 | 0.078 | IPR001938 |
| PIRSF | PIRSF002703 | PR5 | 1 | 94 | 4.6E-17 | IPR001938 |
| PIRSF | PIRSF002703 | PR5 | 118 | 151 | 0.17 | IPR001938 |
| ProSiteProfiles | PS51367 | Thaumatin family profile. | 23 | 175 | 23.240986 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 67 | 78 | 3.2E-22 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 45 | 54 | 3.2E-22 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 165 | 174 | 3.2E-22 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 117 | 133 | 3.2E-22 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 25 | 37 | 3.2E-22 | IPR001938 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G11650.1 | osmotin 34. osmotin-like protein | 9.18E-16 |
| RefSeq | NP_001141293.1 | Thaumatin-like pathogenesis-related protein 4 precursor [Zea mays] | 9.56E-59 |
| P50698 | Thaumatin-like pathogenesis-related protein 4 OS=Avena sativa OX=4498 GN=RASTL-4 PE=2 SV=1 | 2.24E-61 | |
| TrEMBL | A0A5J9WLP6 | Thaumatin-like protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_00167 PE=4 SV=1 | 3.72E-65 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology