Basic Information
Locus ID:
AH05.4065
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Epidermal growth factor-like domain.
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH05 | 57801327 | 57803927 | + | AH05.4065 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.42 | 75,813.32 Da | 32.92 | 88.48 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00054 | EGF_CA | 259 | 297 | 9.10194E-6 | - |
| Pfam | PF00069 | Protein kinase domain | 432 | 630 | 7.3E-27 | IPR000719 |
| SUPERFAMILY | SSF57196 | EGF/Laminin | 255 | 308 | 1.8E-5 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 370 | 641 | 1.6E-57 | IPR011009 |
| Gene3D | G3DSA:2.10.25.10 | Laminin | 262 | 309 | 2.3E-8 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 359 | 423 | 1.7E-13 | - |
| Gene3D | G3DSA:2.10.25.10 | Laminin | 215 | 261 | 3.9E-5 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 438 | 651 | 2.1E-49 | - |
| SMART | SM00181 | egf_5 | 209 | 258 | 33.0 | IPR000742 |
| SMART | SM00179 | egfca_6 | 259 | 308 | 8.5E-9 | IPR001881 |
| SMART | SM00220 | serkin_6 | 387 | 635 | 3.9E-13 | IPR000719 |
| SMART | SM00181 | egf_5 | 262 | 308 | 0.34 | IPR000742 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 311 | 635 | 24.852531 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 483 | 495 | - | IPR008271 |
| ProSitePatterns | PS01187 | Calcium-binding EGF-like domain signature. | 259 | 292 | - | IPR018097 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 393 | 416 | - | IPR017441 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G21270.1 | wall-associated kinase 2. cytoplasmic serine/threonine protein kinase induced by salicylic acid. mutant plants exhibit a loss of cell expansion and dependence on sugars and salts for seedling growth, affecting the expression and activity of vacuolar invertase. | 1.38E-112 |
| RefSeq | XP_004963217.1 | wall-associated receptor kinase 2 [Setaria italica] | 0 |
| Q9LMP1 | Wall-associated receptor kinase 2 OS=Arabidopsis thaliana OX=3702 GN=WAK2 PE=1 SV=1 | 1.33E-111 | |
| TrEMBL | A0A2S3HFJ7 | Protein kinase domain-containing protein OS=Panicum hallii OX=206008 GN=PAHAL_3G498400 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology