Basic Information
Locus ID:
AH05.4064
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Wall-associated receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH05 | 57791911 | 57794787 | + | AH05.4064 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.76 | 83,415.65 Da | 34.21 | 88.50 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00054 | EGF_CA | 301 | 339 | 4.16753E-6 | - |
| CDD | cd14066 | STKc_IRAK | 435 | 700 | 7.21936E-85 | - |
| Pfam | PF13947 | Wall-associated receptor kinase galacturonan-binding | 32 | 95 | 5.3E-10 | IPR025287 |
| Pfam | PF00069 | Protein kinase domain | 430 | 697 | 8.5E-44 | IPR000719 |
| SUPERFAMILY | SSF57196 | EGF/Laminin | 297 | 350 | 3.67E-5 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 411 | 701 | 7.01E-74 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 401 | 504 | 3.6E-30 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 505 | 723 | 1.7E-50 | - |
| Gene3D | G3DSA:2.10.25.10 | Laminin | 304 | 351 | 1.7E-8 | - |
| Gene3D | G3DSA:2.10.25.10 | Laminin | 260 | 303 | 1.3E-5 | - |
| SMART | SM00179 | egfca_6 | 301 | 350 | 7.7E-8 | IPR001881 |
| SMART | SM00181 | egf_5 | 251 | 300 | 25.0 | IPR000742 |
| SMART | SM00220 | serkin_6 | 429 | 702 | 1.5E-33 | IPR000719 |
| SMART | SM00181 | egf_5 | 304 | 350 | 0.18 | IPR000742 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 429 | 702 | 35.071415 | IPR000719 |
| ProSitePatterns | PS01187 | Calcium-binding EGF-like domain signature. | 301 | 334 | - | IPR018097 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 435 | 458 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 550 | 562 | - | IPR008271 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G21210.1 | wall associated kinase 4. cell wall-associated ser/thr kinase involved in cell elongation and lateral root development | 2.9E-148 |
| RefSeq | XP_039802868.1 | wall-associated receptor kinase 2-like [Panicum virgatum] | 0 |
| Q9LMN6 | Wall-associated receptor kinase 4 OS=Arabidopsis thaliana OX=3702 GN=WAK4 PE=2 SV=1 | 2.8E-147 | |
| TrEMBL | A0A8T0UMR0 | Protein kinase domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_3NG279700 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology