Basic Information
Locus ID:
AH05.4026
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH05 | 57403359 | 57405628 | - | AH05.4026 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.05 | 42,093.19 Da | 36.21 | 98.20 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 51 | 318 | 2.28075E-96 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 48 | 315 | 6.2E-47 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 29 | 355 | 6.34E-81 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 121 | 328 | 8.4E-62 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 6 | 120 | 1.2E-32 | - |
| SMART | SM00220 | serkin_6 | 45 | 297 | 5.5E-34 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 45 | 331 | 38.350502 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 51 | 73 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 167 | 179 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G16670.1 | Protein kinase superfamily protein. | 4.93E-144 |
| RefSeq | XP_004963158.1 | cold-responsive protein kinase 1 [Setaria italica] | 2.04E-254 |
| Q93YN1 | Cold-responsive protein kinase 1 OS=Arabidopsis thaliana OX=3702 GN=CRPK1 PE=1 SV=1 | 4.74E-143 | |
| TrEMBL | A0A835AB18 | Protein kinase domain-containing protein OS=Digitaria exilis OX=1010633 GN=HU200_061065 PE=3 SV=1 | 4.61E-253 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology