Basic Information
Locus ID:
AH05.4017
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Extension to Ser/Thr-type protein kinases
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH05 | 57320248 | 57328827 | - | AH05.4017 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.56 | 80,386.67 Da | 56.51 | 66.44 | -0.71 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05599 | STKc_NDR_like | 126 | 497 | 0.0 | - |
| Pfam | PF00433 | Protein kinase C terminal domain | 452 | 496 | 6.9E-6 | IPR017892 |
| Pfam | PF00069 | Protein kinase domain | 129 | 433 | 1.6E-64 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 104 | 485 | 9.98E-87 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 329 | 451 | 1.9E-43 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 126 | 211 | 2.8E-63 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 212 | 280 | 2.8E-63 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 452 | 462 | 1.9E-43 | - |
| SMART | SM00220 | serkin_6 | 128 | 433 | 4.4E-105 | IPR000719 |
| SMART | SM00133 | pkinase_C_6 | 434 | 498 | 9.4E-7 | IPR000961 |
| ProSiteProfiles | PS51285 | AGC-kinase C-terminal domain profile. | 434 | 506 | 14.10635 | IPR000961 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 128 | 433 | 47.396263 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 247 | 259 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 134 | 157 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 554 | 573 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 294 | 317 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 622 | 636 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 46 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 622 | 697 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 9 | 23 | - | - |
| Coils | Coil | Coil | 91 | 114 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G20470.1 | AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein. | 1.36E-272 |
| RefSeq | XP_004963132.1 | serine/threonine-protein kinase tricorner [Setaria italica] | 0 |
| Q9Y2H1 | Serine/threonine-protein kinase 38-like OS=Homo sapiens OX=9606 GN=STK38L PE=1 SV=3 | 4.87E-136 | |
| TrEMBL | K3Z4Z1 | Serine/threonine-protein kinase tricorner-like OS=Setaria italica OX=4555 GN=101779180 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology