Basic Information
Locus ID:
AH05.3742
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH05 | 54022879 | 54029466 | + | AH05.3742 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.96 | 86,481.21 Da | 52.44 | 67.52 | -0.69 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00130 | PAS | 121 | 232 | 2.52591E-6 | IPR000014 |
| CDD | cd13999 | STKc_MAP3K-like | 621 | 767 | 1.12526E-76 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 621 | 767 | 1.8E-40 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 621 | 767 | 1.73E-50 | IPR011009 |
| SUPERFAMILY | SSF55785 | PYP-like sensor domain (PAS domain) | 119 | 232 | 1.68E-7 | IPR035965 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 617 | 781 | 3.5E-57 | - |
| Gene3D | G3DSA:3.30.450.20 | PAS domain | 123 | 238 | 1.2E-12 | - |
| SMART | SM00220 | serkin_6 | 517 | 775 | 1.6E-11 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 462 | 776 | 25.714706 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 634 | 646 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 694 | 716 | 4.2E-10 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 628 | 646 | 4.2E-10 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 738 | 760 | 4.2E-10 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 675 | 685 | 4.2E-10 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 354 | 368 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 302 | 370 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 243 | 264 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 26 | 65 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 247 | 264 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 82 | 108 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 302 | 330 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 45 | 60 | - | - |
| Coils | Coil | Coil | 760 | 787 | - | - |
| Coils | Coil | Coil | 5 | 25 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G67890.1 | PAS domain-containing protein tyrosine kinase family protein. | 8.3E-182 |
| RefSeq | XP_004962761.1 | probable serine/threonine-protein kinase SIS8 isoform X1 [Setaria italica] | 0 |
| Q9FPR3 | Serine/threonine-protein kinase EDR1 OS=Arabidopsis thaliana OX=3702 GN=EDR1 PE=1 SV=1 | 4.81E-57 | |
| TrEMBL | K3Z429 | Protein kinase domain-containing protein OS=Setaria italica OX=4555 GN=101767428 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology