Basic Information
Locus ID:
AH05.3569
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Short Name:
WRKY4
Description:
DNA binding domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH05 | 51920794 | 51925293 | + | AH05.3569 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.72 | 52,829.51 Da | 53.42 | 54.69 | -0.79 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03106 | WRKY DNA -binding domain | 232 | 288 | 6.2E-24 | IPR003657 |
| Pfam | PF03106 | WRKY DNA -binding domain | 389 | 446 | 1.8E-25 | IPR003657 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 230 | 290 | 2.48E-25 | IPR036576 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 380 | 448 | 2.88E-29 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 217 | 291 | 1.5E-27 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 374 | 449 | 2.7E-35 | IPR036576 |
| SMART | SM00774 | WRKY_cls | 388 | 447 | 7.0E-40 | IPR003657 |
| SMART | SM00774 | WRKY_cls | 231 | 289 | 2.5E-34 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 383 | 448 | 37.412945 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 232 | 290 | 23.192444 | IPR003657 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 64 | 90 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 15 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 281 | 367 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 64 | 98 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 454 | 481 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 31 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 440 | 481 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 341 | 363 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 298 | 317 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G13960.1 | WRKY DNA-binding protein 4. Encodes WRKY DNA-binding protein 4 (WRKY4). | 4.75E-110 |
| RefSeq | XP_004962924.1 | probable WRKY transcription factor 3 [Setaria italica] | 1.78E-296 |
| Q9XI90 | Probable WRKY transcription factor 4 OS=Arabidopsis thaliana OX=3702 GN=WRKY4 PE=1 SV=2 | 4.59E-109 | |
| TrEMBL | A0A1E5W542 | Putative WRKY transcription factor 3 OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0006448 PE=4 SV=1 | 1.24E-304 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology