Basic Information
Locus ID:
AH05.3368
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Wall-associated receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH05 | 47510869 | 47512644 | + | AH05.3368 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.20 | 54,568.54 Da | 40.55 | 58.04 | -0.38 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00054 | EGF_CA | 276 | 305 | 0.00116655 | - |
| Pfam | PF07645 | Calcium-binding EGF domain | 276 | 307 | 3.6E-6 | IPR001881 |
| Pfam | PF13947 | Wall-associated receptor kinase galacturonan-binding | 15 | 53 | 3.1E-8 | IPR025287 |
| SUPERFAMILY | SSF57196 | EGF/Laminin | 274 | 308 | 3.21E-7 | - |
| Gene3D | G3DSA:2.10.25.10 | Laminin | 225 | 313 | 2.4E-11 | - |
| SMART | SM00179 | egfca_6 | 276 | 321 | 1.8E-5 | IPR001881 |
| SMART | SM00181 | egf_5 | 279 | 327 | 45.0 | IPR000742 |
| SMART | SM00181 | egf_5 | 439 | 486 | 18.0 | IPR000742 |
| SMART | SM00181 | egf_5 | 226 | 275 | 16.0 | IPR000742 |
| ProSiteProfiles | PS51257 | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 34 | 5.0 | - |
| ProSitePatterns | PS01187 | Calcium-binding EGF-like domain signature. | 276 | 300 | - | IPR018097 |
| ProSitePatterns | PS00010 | Aspartic acid and asparagine hydroxylation site. | 291 | 302 | - | IPR000152 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G21270.1 | wall-associated kinase 2. cytoplasmic serine/threonine protein kinase induced by salicylic acid. mutant plants exhibit a loss of cell expansion and dependence on sugars and salts for seedling growth, affecting the expression and activity of vacuolar invertase. | 1.01E-35 |
| RefSeq | XP_025808621.1 | wall-associated receptor kinase 2-like isoform X2 [Panicum hallii] | 2.26E-161 |
| Q9LMP1 | Wall-associated receptor kinase 2 OS=Arabidopsis thaliana OX=3702 GN=WAK2 PE=1 SV=1 | 1.0E-34 | |
| TrEMBL | A0A811QZW4 | Protein kinase domain-containing protein OS=Miscanthus lutarioriparius OX=422564 GN=NCGR_LOCUS47669 PE=4 SV=1 | 9.48E-168 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology