Basic Information
Locus ID:
AH05.3366
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Wall-associated receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH05 | 47485911 | 47496195 | + | AH05.3366 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.52 | 74,074.78 Da | 38.06 | 86.53 | -0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00054 | EGF_CA | 290 | 320 | 3.80199E-7 | - |
| CDD | cd14066 | STKc_IRAK | 404 | 664 | 9.00523E-86 | - |
| Pfam | PF13947 | Wall-associated receptor kinase galacturonan-binding | 28 | 80 | 8.3E-9 | IPR025287 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 401 | 663 | 4.2E-46 | IPR001245 |
| SUPERFAMILY | SSF57196 | EGF/Laminin | 289 | 322 | 3.35E-7 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 401 | 663 | 3.1E-73 | IPR011009 |
| Gene3D | G3DSA:2.10.25.10 | Laminin | 241 | 331 | 4.4E-11 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 474 | 668 | 1.9E-54 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 376 | 473 | 7.4E-22 | - |
| SMART | SM00181 | egf_5 | 242 | 289 | 29.0 | IPR000742 |
| SMART | SM00181 | egf_5 | 293 | 332 | 13.0 | IPR000742 |
| SMART | SM00220 | serkin_6 | 398 | 666 | 7.3E-38 | IPR000719 |
| SMART | SM00179 | egfca_6 | 290 | 332 | 3.1E-6 | IPR001881 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 398 | 666 | 38.265697 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 518 | 530 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 404 | 428 | - | IPR017441 |
| ProSitePatterns | PS01187 | Calcium-binding EGF-like domain signature. | 290 | 315 | - | IPR018097 |
| ProSitePatterns | PS00010 | Aspartic acid and asparagine hydroxylation site. | 306 | 317 | - | IPR000152 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G21270.1 | wall-associated kinase 2. cytoplasmic serine/threonine protein kinase induced by salicylic acid. mutant plants exhibit a loss of cell expansion and dependence on sugars and salts for seedling growth, affecting the expression and activity of vacuolar invertase. | 1.98E-123 |
| RefSeq | XP_025809058.1 | wall-associated receptor kinase 2-like [Panicum hallii] | 0 |
| Q9LMP1 | Wall-associated receptor kinase 2 OS=Arabidopsis thaliana OX=3702 GN=WAK2 PE=1 SV=1 | 1.91E-122 | |
| TrEMBL | A0A811MBS6 | Protein kinase domain-containing protein OS=Miscanthus lutarioriparius OX=422564 GN=NCGR_LOCUS2610 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology