Basic Information
Locus ID:
AH05.3104
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH05 | 37253811 | 37259903 | - | AH05.3104 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.38 | 103,800.95 Da | 34.20 | 92.70 | -0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 614 | 881 | 9.85756E-91 | - |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 29 | 66 | 3.9E-5 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 612 | 821 | 1.3E-43 | IPR001245 |
| SUPERFAMILY | SSF52058 | L domain-like | 65 | 406 | 2.04E-54 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 594 | 908 | 1.89E-75 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 684 | 889 | 1.5E-53 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 581 | 683 | 2.6E-33 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 189 | 286 | 1.3E-19 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 27 | 188 | 9.3E-45 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 287 | 414 | 5.1E-15 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 140 | 164 | 91.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 608 | 853 | 1.4E-30 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 266 | 289 | 59.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 92 | 116 | 7.9 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 608 | 882 | 37.163246 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 728 | 740 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 614 | 636 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G79620.1 | Leucine-rich repeat protein kinase family protein. | 2.44E-239 |
| RefSeq | XP_034587246.1 | probable leucine-rich repeat receptor-like protein kinase At5g49770 [Setaria viridis] | 0 |
| Q8GZ99 | Leucine-rich repeat receptor protein kinase HPCA1 OS=Arabidopsis thaliana OX=3702 GN=HPCA1 PE=1 SV=1 | 6.3E-212 | |
| TrEMBL | A0A4U6VTH9 | Protein kinase domain-containing protein OS=Setaria viridis OX=4556 GN=SEVIR_3G299800v2 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology