HalophFGD

  • Home
  • Species
  • Search
  • Tools
    • Blast
    • GO enrichment
    • KEGG enrichment
    • Genome browser
    • Sequence extract
    • Network
    • Motif Enrichment
    • Motif Scan
    • Primer Design
  • Download
  • Manual
  • Contact
Basic Information
Locus ID: AH05.3054
Species & Taxonomic ID: Echinochloa crus-galli & 90397
Genome Assembly: GWHBDNR00000000
Description: transposition, RNA-mediated
Maps and Mapping Data
Chromosome Start End Strand ID
AH05 34635940 34637190 + AH05.3054
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
8.13 36,739.18 Da 61.45 67.89 0.02
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Best hit
Source Best Hit ID Description E-value
RefSeq XP_039834481.1 uncharacterized protein LOC120695255 [Panicum virgatum] 5.77E-19
TrEMBL A0A0A9DLF1 Retrotrans_gag domain-containing protein OS=Arundo donax OX=35708 PE=4 SV=1 9.2E-16
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Poaceae Echinochloa crus-galli 2 AH05.3054, CH04.1434
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.