HalophFGD

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Basic Information
Locus ID: AH05.232
Species & Taxonomic ID: Echinochloa crus-galli & 90397
Genome Assembly: GWHBDNR00000000
Description:
Maps and Mapping Data
Chromosome Start End Strand ID
AH05 1972234 1973654 - AH05.232
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
8.99 50,378.37 Da 45.73 69.74 -0.41
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF03478 Protein of unknown function (DUF295) 333 398 1.5E-7 IPR005174
SUPERFAMILY SSF81383 F-box domain 17 63 7.46E-8 IPR036047
Gene3D G3DSA:1.20.1280.50 - 24 64 1.4E-6 -
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_034591859.1 uncharacterized protein LOC117853668 [Setaria viridis] 5.16E-40
TrEMBL A0A1E5VR09 DUF295 domain-containing protein OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0011433 PE=4 SV=1 3.03E-144
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Poaceae Echinochloa crus-galli 5 AH02.803, AH05.232, BH05.263, CH05.316, CH05.75
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.