Basic Information
Locus ID:
AH05.2232
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
source UniProtKB
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH05 | 21492919 | 21497236 | - | AH05.2232 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.91 | 109,067.65 Da | 50.94 | 68.58 | -0.52 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00954 | S-locus glycoprotein domain | 13 | 43 | 4.1E-7 | IPR000858 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 964 | 987 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 927 | 956 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 656 | 679 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 927 | 987 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_035816135.1 | uncharacterized protein LOC103630694 isoform X1 [Zea mays] | 4.2E-55 |
| TrEMBL | A0A8T0MK92 | DUF4283 domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_9NG326800 PE=4 SV=1 | 1.34E-167 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 53 | AH01.2876, AH01.32, AH02.628, AH03.1625, AH03.1818, AH06.974 ... |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_046977 |
| Poaceae | Oryza coarctata | 1 | Oco17G000100 |
| Poaceae | Paspalum vaginatum | 8 | gene-BS78_01G253900, gene-BS78_02G100600, gene-BS78_K215400 ... |
| Poaceae | Puccinellia tenuiflora | 2 | Pt_Chr0302147, Pt_Chr0601454 |
| Poaceae | Sporobolus alterniflorus | 11 | Chr01G023520, Chr01G024930, Chr05G016830, Chr05G025730 ... |
| Poaceae | Zoysia macrostachya | 1 | Zma_g5044 |