Basic Information
Locus ID:
AH05.1958
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
nuclease activity
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH05 | 18513787 | 18518245 | - | AH05.1958 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 10.07 | 97,641.24 Da | 52.19 | 55.21 | -0.85 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | mobidb-lite | consensus disorder prediction | 166 | 187 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 15 | 37 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 15 | 47 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 158 | 270 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 782 | 841 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 244 | 258 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 825 | 841 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 782 | 796 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 608 | 635 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 229 | 243 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 206 | 228 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 345 | 374 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 803 | 824 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 340 | 389 | - | - |
| Coils | Coil | Coil | 226 | 248 | - | - |
KEGG Pathway
Pathway:
ko00270 (Cysteine and methionine metabolism)
map00270 (Cysteine and methionine metabolism)
ko00920 (Sulfur metabolism)
map00920 (Sulfur metabolism)
ko01100 (Metabolic pathways)
map01100 (Metabolic pathways)
ko01120 (Microbial metabolism in diverse environments)
map01120 (Microbial metabolism in diverse environments)
ko04122 (Sulfur relay system)
map04122 (Sulfur relay system)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_039781338.1 | uncharacterized protein LOC120648720 [Panicum virgatum] | 3.0E-103 |
| TrEMBL | A0A3L6TQ14 | Myb_DNA-bind_3 domain-containing protein OS=Panicum miliaceum OX=4540 GN=C2845_PM01G33420 PE=4 SV=1 | 6.96E-45 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||