Basic Information
Locus ID:
AH05.1684
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH05 | 16039592 | 16042844 | + | AH05.1684 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.32 | 111,488.94 Da | 39.09 | 99.52 | 0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 711 | 1001 | 3.28528E-91 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 709 | 998 | 1.1E-41 | IPR001245 |
| Pfam | PF13855 | Leucine rich repeat | 152 | 210 | 1.3E-8 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 35 | 75 | 1.4E-7 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 487 | 547 | 1.2E-9 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 298 | 357 | 3.1E-8 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 66 | 367 | 1.5E-59 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 297 | 604 | 5.1E-55 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 704 | 1000 | 1.48E-68 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 690 | 790 | 3.8E-17 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 791 | 1023 | 1.2E-60 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 191 | 297 | 6.4E-26 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 298 | 624 | 6.5E-85 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 34 | 190 | 2.2E-41 | IPR032675 |
| SMART | SM00220 | serkin_6 | 705 | 1023 | 1.1E-25 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 510 | 533 | 4.9 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 174 | 198 | 11.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 125 | 149 | 170.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 344 | 368 | 31.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 247 | 271 | 96.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 534 | 558 | 290.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 705 | 1009 | 36.060795 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 850 | 862 | - | IPR008271 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 128 | 141 | 4.1E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 510 | 523 | 4.1E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G25930.1 | Protein kinase family protein with leucine-rich repeat domain. | 1.17E-112 |
| RefSeq | XP_039800183.1 | receptor-like protein kinase HSL1 [Panicum virgatum] | 0 |
| O49545 | Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 OS=Arabidopsis thaliana OX=3702 GN=BAM1 PE=1 SV=1 | 1.07E-67 | |
| TrEMBL | A0A8T0UC88 | Protein kinase domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_3NG258139 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology