Basic Information
Locus ID:
AH05.1660
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
ADP binding
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH05 | 15699906 | 15723795 | + | AH05.1660 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.93 | 242,052.95 Da | 45.88 | 88.50 | -0.40 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00931 | NB-ARC domain | 1120 | 1355 | 1.2E-35 | IPR002182 |
| Pfam | PF00069 | Protein kinase domain | 768 | 1036 | 2.5E-42 | IPR000719 |
| Pfam | PF03732 | Retrotransposon gag protein | 386 | 478 | 2.4E-16 | IPR005162 |
| SUPERFAMILY | SSF52058 | L domain-like | 1435 | 2112 | 3.74E-35 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 770 | 1045 | 6.01E-56 | IPR011009 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 1104 | 1370 | 5.7E-50 | IPR027417 |
| SUPERFAMILY | SSF52058 | L domain-like | 1862 | 2111 | 9.52E-9 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 758 | 830 | 4.7E-10 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1633 | 1942 | 3.4E-23 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1490 | 1632 | 3.3E-20 | IPR032675 |
| Gene3D | G3DSA:1.10.10.10 | - | 1355 | 1450 | 2.3E-7 | IPR036388 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 2000 | 2124 | 4.3E-15 | IPR032675 |
| Gene3D | G3DSA:1.10.8.430 | - | 1267 | 1354 | 9.9E-6 | IPR042197 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 850 | 1065 | 2.0E-48 | - |
| Gene3D | G3DSA:3.40.50.300 | - | 1101 | 1260 | 6.0E-30 | IPR027417 |
| SMART | SM00220 | serkin_6 | 767 | 1037 | 4.7E-13 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 756 | 1058 | 30.986687 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 893 | 905 | - | IPR008271 |
| PRINTS | PR00364 | Disease resistance protein signature | 1205 | 1219 | 6.8E-17 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 1138 | 1153 | 6.8E-17 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 1593 | 1609 | 6.8E-17 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 1302 | 1316 | 6.8E-17 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 21 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 730 | 750 | - | - |
| Coils | Coil | Coil | 31 | 51 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G14470.1 | NB-ARC domain-containing disease resistance protein. | 2.46E-45 |
| RefSeq | XP_039801335.1 | putative disease resistance protein RGA3 isoform X1 [Panicum virgatum] | 0 |
| Q7XA42 | Putative disease resistance protein RGA1 OS=Solanum bulbocastanum OX=147425 GN=RGA1 PE=2 SV=2 | 1.05E-54 | |
| TrEMBL | A0A8T0WC75 | Protein kinase domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_2KG120600 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||