Basic Information
Locus ID:
AH05.1513
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH05 | 13839168 | 13846931 | + | AH05.1513 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.52 | 132,936.20 Da | 52.54 | 86.44 | -0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF10536 | Plant mobile domain | 300 | 516 | 2.1E-9 | IPR019557 |
| SUPERFAMILY | SSF56300 | Metallo-dependent phosphatases | 2 | 76 | 2.71E-17 | IPR029052 |
| Gene3D | G3DSA:3.60.21.10 | - | 1 | 76 | 1.2E-21 | IPR029052 |
| SMART | SM00156 | pp2a_7 | 16 | 184 | 0.0023 | IPR006186 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1033 | 1048 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1016 | 1032 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 687 | 730 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 687 | 734 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1013 | 1048 | - | - |
| Coils | Coil | Coil | 1080 | 1100 | - | - |
| Coils | Coil | Coil | 1041 | 1061 | - | - |
| Coils | Coil | Coil | 857 | 905 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G50370.1 | Calcineurin-like metallo-phosphoesterase superfamily protein. | 2.03E-37 |
| RefSeq | XP_047048183.1 | phytochrome-associated serine/threonine-protein phosphatase-like [Lolium rigidum] | 2.84E-41 |
| Q9SX52 | Phytochrome-associated serine/threonine-protein phosphatase 1 OS=Arabidopsis thaliana OX=3702 GN=FYPP1 PE=1 SV=1 | 1.97E-36 | |
| TrEMBL | B8BFQ9 | PMD domain-containing protein OS=Oryza sativa subsp. indica OX=39946 GN=OsI_32741 PE=4 SV=1 | 5.64E-309 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||