HalophFGD

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Basic Information
Locus ID: AH05.128
Species & Taxonomic ID: Echinochloa crus-galli & 90397
Genome Assembly: GWHBDNR00000000
Description: F-box-like
Maps and Mapping Data
Chromosome Start End Strand ID
AH05 1215080 1216342 + AH05.128
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
10.45 40,828.95 Da 66.22 91.05 -0.27
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF12937 F-box-like 38 71 1.5E-8 IPR001810
SUPERFAMILY SSF81383 F-box domain 28 73 3.01E-10 IPR036047
Gene3D G3DSA:1.20.1280.50 - 19 73 4.9E-8 -
SMART SM00256 fbox_2 36 77 0.0063 IPR001810
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_015613807.1 uncharacterized protein LOC4348324 [Oryza sativa Japonica Group] 5.61E-46
TrEMBL K3YC93 F-box domain-containing protein OS=Setaria italica OX=4555 PE=4 SV=1 1.63E-65
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Poaceae Echinochloa crus-galli 5 AH04.211, AH05.128, BH04.204, CH04.225, CH07.1911
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.