Basic Information
Locus ID:
AH05.1277
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH05 | 11820677 | 11824109 | + | AH05.1277 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.42 | 42,263.81 Da | 42.55 | 78.64 | -0.40 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 85 | 353 | 2.28965E-113 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 82 | 353 | 1.6E-63 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 64 | 353 | 8.88E-77 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 179 | 368 | 8.0E-63 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 68 | 162 | 5.4E-19 | - |
| SMART | SM00220 | serkin_6 | 79 | 356 | 1.7E-61 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 79 | 356 | 41.45998 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 220 | 232 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 214 | 232 | 5.7E-16 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 324 | 346 | 5.7E-16 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 280 | 302 | 5.7E-16 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 176 | 189 | 5.7E-16 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 43 | 69 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G01490.1 | Protein kinase superfamily protein. | 2.46E-224 |
| RefSeq | XP_039799740.1 | serine/threonine-protein kinase STY13-like [Panicum virgatum] | 7.65E-274 |
| Q9SSA4 | Serine/threonine-protein kinase 54 OS=Arabidopsis thaliana OX=3702 GN=CBC1 PE=1 SV=1 | 2.36E-223 | |
| TrEMBL | A0A8T0U9G5 | Protein kinase domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_3NG180087 PE=4 SV=1 | 1.73E-272 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology