halophFGD

Basic Information

Locus ID: AH05.1223

Species & Taxonomic ID: Echinochloa crus-galli & 90397

Genome Assembly: GWHBDNR00000000

Description: Voltage-dependent anion channel

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
AH05	11348427	11350312	-	AH05.1223

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
8.52	64,708.67 Da	46.48	91.75	0.13

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
CDD	cd09323	TDT_SLAC1_like	210	512	8.9737E-111	-
Pfam	PF03595	Voltage-dependent anion channel	211	512	2.5E-46	IPR004695
Gene3D	G3DSA:1.50.10.150	-	207	523	8.6E-69	IPR038665
MobiDBLite	mobidb-lite	consensus disorder prediction	90	116	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	562	576	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	141	173	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	84	122	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	561	587	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	1	24	-	-

Gene Ontology

Biological Process:

GO:0055085 (transmembrane transport)

Cellular Component:

GO:0016020 (membrane)

Best hit

Source	Best Hit ID	Description	E-value
TAIR	AT5G24030.1	SLAC1 homologue 3. Encodes a protein with ten predicted transmembrane helices. The SLAH3 protein has similarity to the SLAC1 protein involved in ion homeostasis in guard cells. Although it is not expressed in guard cells, it can complement an slac1-2 mutant suggesting that it performs a similar function. SLAH3:GFP localizes to the plasma membrane.	1.88E-174
RefSeq	XP_039799676.1	S-type anion channel SLAH2-like [Panicum virgatum]	0
Swiss-Prot	Q9FLV9	S-type anion channel SLAH3 OS=Arabidopsis thaliana OX=3702 GN=SLAH3 PE=1 SV=1	1.81E-173
TrEMBL	A0A2T7E9U0	S-type anion channel SLAH2 OS=Panicum hallii var. hallii OX=1504633 GN=GQ55_3G153400 PE=3 SV=1	0

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	4	jg13925, jg2235, jg33951, jg7573
Aizoaceae	Mesembryanthemum crystallinum	2	gene_14814, gene_16178
Amaranthaceae	Atriplex hortensis	2	Ah003641, Ah018762
Amaranthaceae	Beta vulgaris	2	BVRB_3g052940, BVRB_5g101630
Amaranthaceae	Salicornia bigelovii	4	Sbi_jg15181, Sbi_jg4586, Sbi_jg56014, Sbi_jg7479
Amaranthaceae	Salicornia europaea	2	Seu_jg12554, Seu_jg26493
Amaranthaceae	Suaeda aralocaspica	2	GOSA_00001320, GOSA_00019972
Amaranthaceae	Suaeda glauca	4	Sgl01482, Sgl06648, Sgl51839, Sgl57131
Amaranthaceae	Chenopodium album	6	gene:ENSEOMG00000002818, gene:ENSEOMG00000007573 ... gene:ENSEOMG00000023515, gene:ENSEOMG00000024773, gene:ENSEOMG00000032392, gene:ENSEOMG00000043037
Amaranthaceae	Chenopodium quinoa	4	CQ.Regalona.r1.3AG0003940, CQ.Regalona.r1.3BG0004110 ... CQ.Regalona.r1.5AG0008850, CQ.Regalona.r1.5BG0009190
Anacardiaceae	Pistacia vera	2	pistato.v30143280, pistato.v30202800
Apiaceae	Apium graveolens	4	Ag10G02559, Ag4G02910, Ag4G02913, Ag9G02412
Arecaceae	Cocos nucifera	6	COCNU_02G003300, COCNU_03G012480, COCNU_06G003390 ... COCNU_07G007420, COCNU_14G001960, COCNU_14G001970
Arecaceae	Phoenix dactylifera	7	gene-LOC103700155, gene-LOC103709012, gene-LOC103709014 ... gene-LOC103709015, gene-LOC103710982, gene-LOC103715998, gene-LOC103718542
Asparagaceae	Asparagus officinalis	3	AsparagusV1_01.1448.V1.1, AsparagusV1_05.1886.V1.1 ... AsparagusV1_Unassigned.646.V1.1
Asteraceae	Flaveria trinervia	3	Ftri13G18578, Ftri4G30928, FtriNA25147
Brassicaceae	Arabidopsis thaliana	3	AT1G12480.1, AT4G27970.1, AT5G24030.1
Brassicaceae	Eutrema salsugineum	3	Thhalv10003801m.g.v1.0, Thhalv10007262m.g.v1.0 ... Thhalv10024941m.g.v1.0
Brassicaceae	Schrenkiella parvula	3	Sp1g11080.v2.2, Sp2g23280.v2.2, Sp7g25930.v2.2
Brassicaceae	Brassica nigra	7	BniB02g076980.2N, BniB02g083250.2N, BniB03g011930.2N ... BniB04g003350.2N, BniB04g027280.2N, BniB05g009470.2N, BniB07g040400.2N
Casuarinaceae	Casuarina equisetifolia	3	Ceq03G0520, Ceq09G1515, Ceq09G1516
Casuarinaceae	Casuarina glauca	3	Cgl03G0629, Cgl09G1614, Cgl09G1615
Cymodoceaceae	Cymodocea nodosa	3	gene.Cymno12g02040, gene.Cymno12g02050, gene.Cymno16g02320
Hydrocharitaceae	Thalassia testudinum	2	gene.Thate03g17240, gene.Thate09g15500
Nitrariaceae	Nitraria sibirica	2	evm.TU.LG01.2814, evm.TU.LG10.1291
Plantaginaceae	Plantago ovata	7	Pov_00001228, Pov_00004514, Pov_00004703, Pov_00010558 ... Pov_00012978, Pov_00034015, Pov_00041053
Plumbaginaceae	Limonium bicolor	4	Lb2G10180, Lb2G10971, Lb2G14160, Lb7G35025
Poaceae	Echinochloa crus-galli	20	AH02.116, AH02.2382, AH05.1223, AH05.3232, AH05.608, BH02.98 ... AH09.2009, BH02.2492, BH04.791, BH05.1405, BH05.3272, BH05.660, BH09.2168, CH01.2625, CH02.128, CH02.2670, CH05.1575, CH05.1577, CH05.3356, CH09.2313
Poaceae	Eleusine coracana subsp. coracana	11	gene-QOZ80_1AG0001110, gene-QOZ80_1AG0025140 ... gene-QOZ80_1BG0049550, gene-QOZ80_1BG0075690, gene-QOZ80_4AG0306710, gene-QOZ80_4BG0337710, gene-QOZ80_5AG0361630, gene-QOZ80_5AG0387460, gene-QOZ80_5AG0401360, gene-QOZ80_5BG0410030, gene-QOZ80_5BG0449950
Poaceae	Hordeum vulgare	9	HORVU.MOREX.r3.1HG0032200.1, HORVU.MOREX.r3.1HG0092820.1 ... HORVU.MOREX.r3.1HG0092840.1, HORVU.MOREX.r3.1HG0092850.1, HORVU.MOREX.r3.1HG0092860.1, HORVU.MOREX.r3.2HG0186720.1, HORVU.MOREX.r3.3HG0224010.1, HORVU.MOREX.r3.3HG0248350.1, HORVU.MOREX.r3.3HG0273350.1
Poaceae	Lolium multiflorum	13	gene-QYE76_010517, gene-QYE76_015155, gene-QYE76_015156 ... gene-QYE76_015159, gene-QYE76_015168, gene-QYE76_015172, gene-QYE76_015181, gene-QYE76_045679, gene-QYE76_051548, gene-QYE76_053881, gene-QYE76_053882, gene-QYE76_053949, gene-QYE76_053954
Poaceae	Oryza coarctata	12	Oco01G005590, Oco01G010580, Oco01G014910, Oco02G005670 ... Oco02G011320, Oco02G015230, Oco07G013700, Oco09G004780, Oco09G017940, Oco10G004000, Oco10G017830, Oco10G017840
Poaceae	Oryza sativa	7	LOC_Os01g12680.1, LOC_Os01g28840.1, LOC_Os01g43460.2 ... LOC_Os04g48530.1, LOC_Os05g13320.1, LOC_Os05g50770.2, LOC_Os07g08350.1
Poaceae	Paspalum vaginatum	8	gene-BS78_03G008600, gene-BS78_03G199900, gene-BS78_K174100 ... gene-BS78_06G053900, gene-BS78_06G194500, gene-BS78_09G087200, gene-BS78_09G251700, gene-BS78_09G251800
Poaceae	Puccinellia tenuiflora	10	Pt_Chr0100847, Pt_Chr0207560, Pt_Chr0307273, Pt_Chr0307318 ... Pt_Chr0501477, Pt_Chr0505993, Pt_Chr0505995, Pt_Chr0603442, Pt_Chr0603478, Pt_Ctg00227
Poaceae	Sporobolus alterniflorus	15	Chr02G014960, Chr03G000420, Chr03G011380, Chr05G018790 ... Chr08G005230, Chr08G011570, Chr11G007630, Chr12G025840, Chr18G004630, Chr18G016300, Chr22G000300, Chr22G012680, Chr25G005020, Chr26G013520, Chr30G004840
Poaceae	Thinopyrum elongatum	13	Tel1E01G095400, Tel1E01G232100, Tel1E01G601800 ... Tel1E01G710500, Tel1E01G711700, Tel1E01G711800, Tel1E01G711900, Tel1E01G712000, Tel1E01G712300, Tel2E01G693200, Tel3E01G049000, Tel3E01G278800, Tel3E01G385300
Poaceae	Triticum dicoccoides	20	gene_TRIDC1AG018360, gene_TRIDC1AG062210 ... gene_TRIDC1AG062340, gene_TRIDC1AG062350, gene_TRIDC1AG062380, gene_TRIDC1BG023130, gene_TRIDC1BG062130, gene_TRIDC1BG062140, gene_TRIDC1BG071360, gene_TRIDC1BG071520, gene_TRIDC1BG071530, gene_TRIDC1BG071550, gene_TRIDC2AG057610, gene_TRIDC2BG060440, gene_TRIDC3AG000170, gene_TRIDC3AG020330, gene_TRIDC3AG033690, gene_TRIDC3BG003050, gene_TRIDC3BG030640, gene_TRIDC3BG038230
Poaceae	Triticum aestivum	37	TraesCS1A02G127500.1, TraesCS1A02G423000.1 ... TraesCS1A02G423900.1, TraesCS1A02G424400.1, TraesCS1A02G424500.1, TraesCS1B02G147400.1, TraesCS1B02G388600.1, TraesCS1B02G455100.1, TraesCS1B02G456000.1, TraesCS1B02G456100.1, TraesCS1B02G456200.1, TraesCS1B02G456300.1, TraesCS1B02G456400.1, TraesCS1B02G456500.1, TraesCS1D02G126500.1, TraesCS1D02G432500.1, TraesCS1D02G432700.1, TraesCS1D02G432800.1, TraesCS1D02G432900.1, TraesCS1D02G433100.1, TraesCS1D02G433200.1, TraesCS2A02G398000.1, TraesCS2B02G416100.1, TraesCS2D02G395700.1, TraesCS3A02G028100.1, TraesCS3A02G151400.1, TraesCS3A02G225100.1, TraesCS3B02G018300.1, TraesCS3B02G178600.1, TraesCS3B02G254700.1, TraesCS3D02G017800.1, TraesCS3D02G159600.1, TraesCS3D02G228400.1, TraesCSU02G001400.1, TraesCSU02G001500.1, TraesCSU02G001600.1, TraesCSU02G204200.1.cds1
Poaceae	Zea mays	9	Zm00001eb073420_P001, Zm00001eb119430_P001 ... Zm00001eb137340_P001, Zm00001eb159490_P001, Zm00001eb284750_P001, Zm00001eb297200_P001, Zm00001eb344870_P001, Zm00001eb350550_P001, Zm00001eb358580_P004
Poaceae	Zoysia japonica	7	nbis-gene-17949, nbis-gene-24296, nbis-gene-24734 ... nbis-gene-29203, nbis-gene-32703, nbis-gene-50542, nbis-gene-5613
Poaceae	Zoysia macrostachya	8	Zma_g10682, Zma_g21819, Zma_g27870, Zma_g28894, Zma_g7194 ... Zma_g7195, Zma_g8251, Zma_g9519
Portulacaceae	Portulaca oleracea	10	evm.TU.LG01.1458, evm.TU.LG01.1468, evm.TU.LG01.1470 ... evm.TU.LG04.3476, evm.TU.LG06.1925, evm.TU.LG06.1926, evm.TU.LG14.736, evm.TU.LG14.744, evm.TU.LG14.745, evm.TU.LG16.110
Posidoniaceae	Posidonia oceanica	4	gene.Posoc09g01660, gene.Posoc09g01670, gene.Posoc09g08120 ... gene.Posoc09g08160
Rhizophoraceae	Bruguiera sexangula	3	evm.TU.Scaffold_11_RagTag.1454, evm.TU.Scaffold_4_RagTag.67 ... evm.TU.Scaffold_16_RagTag.255
Rhizophoraceae	Carallia pectinifolia	3	nbisL1-mrna-22496, nbisL1-mrna-29274, nbisL1-mrna-29276
Rhizophoraceae	Ceriops tagal	3	nbisL1-mrna-20545, nbisL1-mrna-3119, nbisL1-mrna-5671
Rhizophoraceae	Ceriops zippeliana	4	nbisL1-mrna-20262, nbisL1-mrna-2211, nbisL1-mrna-22461 ... nbisL1-mrna-22462
Rhizophoraceae	Kandelia candel	3	evm.TU.utg000008l.38, evm.TU.utg000010l.414 ... evm.TU.utg000022l.340
Rhizophoraceae	Kandelia obovata	3	Maker00001548, Maker00008540, Maker00014425
Rhizophoraceae	Rhizophora apiculata	3	nbisL1-mrna-1122, nbisL1-mrna-2318, nbisL1-mrna-3481
Rhizophoraceae	Rhizophora mangle	3	nbisL1-mrna-20535, nbisL1-mrna-6329, nbisL1-mrna-6624
Salicaceae	Populus euphratica	2	populus_peu03464, populus_peu28144
Solanaceae	Lycium barbarum	3	gene-LOC132631991, gene-LOC132635018, gene-LOC132639464
Solanaceae	Solanum chilense	4	SOLCI002240100, SOLCI005464700, SOLCI006268000 ... SOLCI006876500
Solanaceae	Solanum pennellii	4	gene-LOC107012093, gene-LOC107022641, gene-LOC107029028 ... gene-LOC107029865
Tamaricaceae	Reaumuria soongarica	2	STRG.7757_chr04_-, gene_14118
Tamaricaceae	Tamarix chinensis	2	TC01G4116, TC06G2292
Zosteraceae	Zostera marina	3	Zosma01g09450.v3.1, Zosma05g00670.v3.1, Zosma05g03620.v3.1