Basic Information
Locus ID:
AH05.1118
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH05 | 10152995 | 10159245 | - | AH05.1118 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.97 | 56,122.90 Da | 34.13 | 97.73 | -0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 104 | 162 | 1.7E-9 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 302 | 512 | 3.8E-38 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 36 | 76 | 1.0E-9 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 283 | 513 | 1.78E-62 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 36 | 169 | 9.35E-29 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 35 | 191 | 1.7E-40 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 273 | 377 | 1.5E-34 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 378 | 515 | 2.6E-37 | - |
| SMART | SM00220 | serkin_6 | 301 | 514 | 2.5E-12 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 301 | 516 | 34.534321 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 434 | 446 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 307 | 329 | - | IPR017441 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 149 | 162 | 6.7E-6 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 128 | 141 | 6.7E-6 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G60800.1 | NSP-interacting kinase 3. | 1.15E-101 |
| RefSeq | XP_034586483.1 | protein NSP-INTERACTING KINASE 3-like [Setaria viridis] | 9.48E-172 |
| Q93ZS4 | Protein NSP-INTERACTING KINASE 3 OS=Arabidopsis thaliana OX=3702 GN=NIK3 PE=1 SV=1 | 1.12E-100 | |
| TrEMBL | A0A2T7E8S6 | Protein kinase domain-containing protein OS=Panicum hallii var. hallii OX=1504633 GN=GQ55_3G127300 PE=3 SV=1 | 2.77E-162 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||