HalophFGD

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Basic Information
Locus ID: AH05.1023
Species & Taxonomic ID: Echinochloa crus-galli & 90397
Genome Assembly: GWHBDNR00000000
Description:
Maps and Mapping Data
Chromosome Start End Strand ID
AH05 9195670 9200163 - AH05.1023
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
4.92 58,483.06 Da 40.31 93.85 -0.11
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF03478 Protein of unknown function (DUF295) 445 475 2.4E-7 IPR005174
SUPERFAMILY SSF81383 F-box domain 161 221 3.14E-6 IPR036047
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_002463391.1 uncharacterized protein LOC8074449 [Sorghum bicolor] 4.18E-49
TrEMBL A0A2T7E8F2 DUF295 domain-containing protein OS=Panicum hallii var. hallii OX=1504633 GN=GQ55_3G117500 PE=4 SV=1 2.36E-182
Expression
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BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Poaceae Echinochloa crus-galli 3 AH05.1023, BH05.1073, CH05.1223
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.