Basic Information
Locus ID:
AH04.971
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
synthase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH04 | 15106362 | 15112859 | + | AH04.971 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.91 | 102,155.40 Da | 45.42 | 67.60 | -0.64 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03936 | Terpene synthase family, metal binding domain | 1 | 198 | 4.8E-56 | IPR005630 |
| SUPERFAMILY | SSF48576 | Terpenoid synthases | 2 | 209 | 5.76E-49 | IPR008949 |
| Gene3D | G3DSA:1.10.600.10 | Farnesyl Diphosphate Synthase | 1 | 214 | 4.5E-55 | IPR008949 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 762 | 793 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 749 | 793 | - | - |
| Coils | Coil | Coil | 290 | 310 | - | - |
Gene Ontology
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G24210.1 | terpene synthase 10. | 7.64E-20 |
| RefSeq | XP_034603105.1 | tau-cadinol synthase-like isoform X2 [Setaria viridis] | 1.58E-89 |
| Q5GJ59 | Tau-cadinol synthase OS=Zea mays OX=4577 GN=TPS7 PE=1 SV=1 | 2.95E-64 | |
| TrEMBL | A0A2T7CL79 | (+)-delta-cadinene synthase OS=Panicum hallii var. hallii OX=1504633 GN=GQ55_8G062300 PE=4 SV=1 | 7.04E-114 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||