Basic Information
Locus ID:
AH04.868
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
F-box domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH04 | 12913829 | 12915472 | - | AH04.868 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.27 | 60,341.58 Da | 52.23 | 86.62 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03478 | Protein of unknown function (DUF295) | 459 | 496 | 2.1E-6 | IPR005174 |
| Pfam | PF16913 | Purine nucleobase transmembrane transport | 2 | 93 | 2.4E-12 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 116 | 139 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 96 | 139 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G28220.1 | purine permease 3. Member of a family of proteins related to PUP1, a purine transporter. May be involved in the transport of purine and purine derivatives such as cytokinins, across the plasma membrane. | 4.27E-9 |
| RefSeq | XP_004954730.1 | uncharacterized protein LOC101776267 [Setaria italica] | 1.6E-152 |
| Q9FZ95 | Purine permease 3 OS=Arabidopsis thaliana OX=3702 GN=PUP3 PE=2 SV=1 | 4.23E-8 | |
| TrEMBL | K3Z0G0 | F-box domain-containing protein OS=Setaria italica OX=4555 PE=4 SV=1 | 1.52E-152 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology