Basic Information
Locus ID:
AH04.816
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Serine/Threonine protein kinases, catalytic domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH04 | 12161909 | 12175244 | - | AH04.816 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.57 | 249,570.27 Da | 48.76 | 77.32 | -0.41 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd07840 | STKc_CDK9_like | 1736 | 2020 | 6.42776E-138 | - |
| Pfam | PF00078 | Reverse transcriptase (RNA-dependent DNA polymerase) | 1088 | 1237 | 1.9E-11 | IPR000477 |
| Pfam | PF00069 | Protein kinase domain | 1736 | 2020 | 3.3E-65 | IPR000719 |
| Pfam | PF13966 | zinc-binding in reverse transcriptase | 1450 | 1533 | 2.4E-20 | IPR026960 |
| SUPERFAMILY | SSF56219 | DNase I-like | 831 | 1059 | 9.42E-30 | IPR036691 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 1729 | 2024 | 1.75E-86 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1731 | 1823 | 3.5E-24 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1824 | 2061 | 1.7E-68 | - |
| Gene3D | G3DSA:3.60.10.10 | Endonuclease/exonuclease/phosphatase | 826 | 1060 | 1.6E-30 | IPR036691 |
| SMART | SM00220 | serkin_6 | 1736 | 2020 | 4.5E-86 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1736 | 2020 | 43.876896 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 1742 | 1765 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 1856 | 1868 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 20 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 86 | 101 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 731 | 753 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 78 | 113 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 45 | - | - |
| Coils | Coil | Coil | 2205 | 2232 | - | - |
| Coils | Coil | Coil | 2038 | 2058 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G53050.1 | Protein kinase superfamily protein. | 1.57E-161 |
| RefSeq | XP_012704076.1 | probable serine/threonine-protein kinase At1g54610 [Setaria italica] | 0 |
| F4I114 | Probable serine/threonine-protein kinase At1g09600 OS=Arabidopsis thaliana OX=3702 GN=At1g09600 PE=3 SV=1 | 1.83E-151 | |
| TrEMBL | A0A1E5WDW9 | Putative serine/threonine-protein kinase OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0003388 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology