Basic Information
Locus ID:
AH04.74
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Plant protein of unknown function (DUF641)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH04 | 640983 | 642323 | + | AH04.74 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.68 | 48,823.23 Da | 47.34 | 81.44 | -0.18 |
Protein Domain:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G45260.1 | Plant protein of unknown function (DUF641). | 1.33E-39 |
| RefSeq | XP_034601762.1 | protein GRAVITROPIC IN THE LIGHT 1-like [Setaria viridis] | 1.91E-220 |
| TrEMBL | A0A4U6TX79 | DUF641 domain-containing protein OS=Setaria viridis OX=4556 GN=SEVIR_7G311980v2 PE=4 SV=1 | 4.32E-219 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 3 | AH04.74, BH04.79, CH04.136 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_9AG0672440, gene-QOZ80_9BG0696020 |
| Poaceae | Oryza coarctata | 3 | Oco22G000430, Oco23G000340, Oco23G000410 |
| Poaceae | Oryza sativa | 2 | LOC_Os11g02270.1, LOC_Os12g02230.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_08G020200 |
| Poaceae | Zea mays | 2 | Zm00001eb406160_P001, Zm00001eb406180_P001 |