Basic Information
Locus ID:
AH04.714
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
F-box domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH04 | 9493010 | 9494140 | - | AH04.714 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.47 | 40,052.79 Da | 40.91 | 68.83 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01344 | Kelch motif | 172 | 218 | 1.8E-10 | IPR006652 |
| Pfam | PF00646 | F-box domain | 24 | 56 | 2.3E-6 | IPR001810 |
| Pfam | PF01344 | Kelch motif | 129 | 170 | 2.2E-4 | IPR006652 |
| SUPERFAMILY | SSF117281 | Kelch motif | 100 | 363 | 5.89E-44 | IPR015915 |
| SUPERFAMILY | SSF81383 | F-box domain | 15 | 61 | 1.28E-8 | IPR036047 |
| Gene3D | G3DSA:2.120.10.80 | - | 40 | 298 | 5.8E-37 | IPR015915 |
| Gene3D | G3DSA:2.120.10.80 | - | 299 | 375 | 3.3E-5 | IPR015915 |
| SMART | SM00612 | kelc_smart | 184 | 233 | 3.5E-5 | IPR006652 |
| SMART | SM00612 | kelc_smart | 135 | 183 | 1.2E-5 | IPR006652 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G44130.1 | Galactose oxidase/kelch repeat superfamily protein. | 3.06E-65 |
| RefSeq | XP_025827219.1 | F-box/kelch-repeat protein At2g44130-like [Panicum hallii] | 8.77E-262 |
| O80582 | F-box/kelch-repeat protein At2g44130 OS=Arabidopsis thaliana OX=3702 GN=At2g44130 PE=2 SV=2 | 2.97E-64 | |
| TrEMBL | A0A1E5VAS5 | F-box/kelch-repeat protein OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0016726 PE=4 SV=1 | 1.47E-264 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology