Basic Information
Locus ID:
AH04.335
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH04 | 3585066 | 3592613 | + | AH04.335 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.34 | 93,920.45 Da | 38.77 | 72.67 | -0.49 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 550 | 589 | 9.6E-4 | IPR001680 |
| Pfam | PF00069 | Protein kinase domain | 37 | 293 | 5.9E-48 | IPR000719 |
| Pfam | PF00400 | WD domain, G-beta repeat | 595 | 633 | 0.041 | IPR001680 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 21 | 300 | 1.12E-67 | IPR011009 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 464 | 687 | 4.79E-28 | IPR036322 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 128 | 318 | 7.1E-48 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 16 | 110 | 1.7E-23 | - |
| Gene3D | G3DSA:2.130.10.10 | - | 473 | 701 | 8.5E-45 | IPR015943 |
| SMART | SM00320 | WD40_4 | 503 | 544 | 460.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 548 | 589 | 0.0034 | IPR001680 |
| SMART | SM00320 | WD40_4 | 593 | 633 | 8.7E-6 | IPR001680 |
| SMART | SM00320 | WD40_4 | 461 | 500 | 8.5 | IPR001680 |
| SMART | SM00220 | serkin_6 | 37 | 296 | 8.1E-38 | IPR000719 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 600 | 636 | 9.783781 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 37 | 302 | 36.922966 | IPR000719 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 600 | 642 | 12.480124 | IPR001680 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 169 | 181 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 43 | 65 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 756 | 773 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 706 | 773 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 723 | 752 | - | - |
| Coils | Coil | Coil | 1 | 21 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G04570.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 40. Encodes a cysteine-rich receptor-like protein kinase. | 8.35E-52 |
| RefSeq | XP_035821246.1 | uncharacterized protein LOC103647051 isoform X4 [Zea mays] | 6.18E-194 |
| Q9SYS3 | Cysteine-rich receptor-like protein kinase 40 OS=Arabidopsis thaliana OX=3702 GN=CRK40 PE=2 SV=1 | 8.19E-51 | |
| TrEMBL | A0A804MK35 | Protein kinase domain-containing protein OS=Zea mays OX=4577 PE=4 SV=1 | 1.76E-191 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology