Basic Information
Locus ID:
AH04.2288
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Thaumatin family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH04 | 44446548 | 44446763 | - | AH04.2288 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.27 | 7,192.97 Da | 44.41 | 56.62 | 0.04 |
Protein Domain:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_039845556.1 | osmotin-like protein [Panicum virgatum] | 1.94E-28 |
| TrEMBL | A0A1E5W412 | Osmotin-like protein OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0006857 PE=4 SV=1 | 5.99E-32 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 4 | AH04.2288, AH06.711, BH04.2359, CH04.2700 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_9AG0693120, gene-QOZ80_9BG0718890 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.4HG0358550.1.CDS1 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_065465 |
| Poaceae | Oryza coarctata | 3 | Oco21G010080, Oco22G011390, Oco22G011400 |
| Poaceae | Oryza sativa | 2 | LOC_Os11g47670.1, LOC_Os11g47680.1 |
| Poaceae | Paspalum vaginatum | 4 | gene-BS78_05G264900, gene-BS78_05G282600, gene-BS78_K334800 ... |
| Poaceae | Sporobolus alterniflorus | 4 | Chr07G013680, Chr0G006710, Chr26G000200, Chr31G008700 |
| Poaceae | Thinopyrum elongatum | 1 | Tel4E01G222100 |
| Poaceae | Triticum dicoccoides | 1 | gene_TRIDC4AG028160 |
| Poaceae | Triticum aestivum | 3 | TraesCS4A02G174300.1.cds1, TraesCS4B02G143200.1.cds1 ... |
| Poaceae | Zea mays | 2 | Zm00001eb047690_P001, Zm00001eb164710_P001 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-45970 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g19156 |