Basic Information
Locus ID:
AH04.2265
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH04 | 43934807 | 43937871 | + | AH04.2265 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.74 | 22,889.34 Da | 100.42 | 61.52 | -0.40 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF57756 | Retrovirus zinc finger-like domains | 155 | 192 | 8.55E-5 | IPR036875 |
| Gene3D | G3DSA:4.10.60.10 | - | 103 | 199 | 3.1E-7 | - |
| ProSiteProfiles | PS50158 | Zinc finger CCHC-type profile. | 176 | 191 | 8.910993 | IPR001878 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 61 | 132 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 189 | 224 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TrEMBL | A0A8T0Q7D2 | CCHC-type domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_7NG446101 PE=4 SV=1 | 6.1E-8 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||