Basic Information
Locus ID:
AH04.2252
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH04 | 43537914 | 43542328 | - | AH04.2252 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.82 | 67,746.61 Da | 44.38 | 82.87 | -0.42 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 164 | 439 | 2.6E-48 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 136 | 443 | 9.29E-68 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 126 | 236 | 7.2E-25 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 254 | 473 | 3.8E-47 | - |
| SMART | SM00220 | serkin_6 | 162 | 449 | 1.0E-30 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 162 | 458 | 37.163246 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 168 | 190 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 297 | 309 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G00960.1 | Protein kinase superfamily protein. | 5.7E-54 |
| RefSeq | XP_021302060.1 | uncharacterized protein LOC8067139 isoform X1 [Sorghum bicolor] | 6.94E-139 |
| O23082 | Cysteine-rich receptor-like protein kinase 44 OS=Arabidopsis thaliana OX=3702 GN=CRK44 PE=3 SV=2 | 5.53E-53 | |
| TrEMBL | A0A5J9VIA5 | Protein kinase domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_17836 PE=3 SV=1 | 2.78E-160 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 2 | AH04.2252, CH04.2661 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.3HG0221540.1 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_049244 |
| Poaceae | Puccinellia tenuiflora | 3 | Pt_Chr0702314, Pt_Chr0702315, Pt_Chr0702317 |
| Poaceae | Triticum aestivum | 2 | TraesCS3D02G022700.2, TraesCS7B02G357700.1 |