Basic Information
Locus ID:
AH04.2134
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH04 | 41870822 | 41875827 | + | AH04.2134 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.88 | 76,545.94 Da | 47.20 | 76.92 | -0.43 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 403 | 675 | 3.8E-40 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 383 | 678 | 4.45E-74 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 371 | 476 | 1.5E-28 | - |
| Gene3D | G3DSA:1.20.930.20 | - | 205 | 309 | 3.5E-13 | IPR036537 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 477 | 690 | 5.4E-54 | - |
| SMART | SM00220 | serkin_6 | 401 | 685 | 2.4E-25 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 401 | 685 | 34.647392 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 522 | 534 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 407 | 429 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 25 | 143 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23240.2 | - | 3.92E-75 |
| RefSeq | XP_039777915.1 | cysteine-rich receptor-like protein kinase 25 [Panicum virgatum] | 1.62E-275 |
| Q9SYS7 | Putative cysteine-rich receptor-like protein kinase 39 OS=Arabidopsis thaliana OX=3702 GN=CRK39 PE=3 SV=1 | 1.05E-73 | |
| TrEMBL | A0A2T7CQX7 | Protein kinase domain-containing protein OS=Panicum hallii var. hallii OX=1504633 GN=GQ55_8G248500 PE=4 SV=1 | 2.74E-276 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 3 | AH04.2134, BH04.2218, CH04.2559 |
| Poaceae | Oryza coarctata | 3 | Oco21G009490, Oco21G009540, Oco22G010880 |
| Poaceae | Oryza sativa | 2 | LOC_Os11g44660.1, LOC_Os11g44690.1 |