HalophFGD

  • Home
  • Species
  • Search
  • Tools
    • Blast
    • GO enrichment
    • KEGG enrichment
    • Genome browser
    • Sequence extract
    • Network
    • Motif Enrichment
    • Motif Scan
    • Primer Design
  • Download
  • Manual
  • Contact
Basic Information
Locus ID: AH04.211
Species & Taxonomic ID: Echinochloa crus-galli & 90397
Genome Assembly: GWHBDNR00000000
Description: F-box-like
Maps and Mapping Data
Chromosome Start End Strand ID
AH04 2294062 2294445 + AH04.211
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
9.34 14,050.99 Da 69.59 81.50 -0.12
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF12937 F-box-like 21 54 3.1E-9 IPR001810
SUPERFAMILY SSF81383 F-box domain 11 56 3.79E-10 IPR036047
Gene3D G3DSA:1.20.1280.50 - 18 61 7.7E-8 -
SMART SM00256 fbox_2 19 60 0.0029 IPR001810
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_006662268.2 uncharacterized protein LOC102721960 [Oryza brachyantha] 4.41E-22
TrEMBL A0A1E5V8K0 F-box domain-containing protein (Fragment) OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0017628 PE=4 SV=1 7.31E-28
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Poaceae Echinochloa crus-galli 5 AH04.211, AH05.128, BH04.204, CH04.225, CH07.1911
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.