Basic Information
Locus ID:
AH04.2063
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Wall-associated receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH04 | 40931969 | 40941387 | + | AH04.2063 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.33 | 67,011.52 Da | 52.41 | 92.28 | -0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 154 | 434 | 1.3E-51 | IPR000719 |
| Pfam | PF00635 | MSP (Major sperm protein) domain | 455 | 550 | 3.1E-10 | IPR000535 |
| SUPERFAMILY | SSF49354 | PapD-like | 450 | 561 | 1.41E-15 | IPR008962 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 137 | 439 | 1.8E-67 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 121 | 224 | 9.3E-26 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 245 | 450 | 6.0E-53 | - |
| Gene3D | G3DSA:2.60.40.10 | Immunoglobulins | 451 | 588 | 2.1E-20 | IPR013783 |
| SMART | SM00220 | serkin_6 | 153 | 437 | 7.7E-34 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 153 | 439 | 36.838165 | IPR000719 |
| ProSiteProfiles | PS50202 | Major sperm protein (MSP) domain profile. | 454 | 587 | 13.619525 | IPR000535 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 159 | 182 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 288 | 300 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G38830.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 26. Encodes a cysteine-rich receptor-like protein kinase. | 9.0E-61 |
| RefSeq | XP_015636625.1 | putative receptor-like protein kinase At4g00960 isoform X2 [Oryza sativa Japonica Group] | 4.92E-227 |
| Q9T0J1 | Cysteine-rich receptor-like protein kinase 26 OS=Arabidopsis thaliana OX=3702 GN=CRK26 PE=2 SV=1 | 8.81E-60 | |
| TrEMBL | Q7XVI0 | OSJNBa0016N04.14 protein OS=Oryza sativa subsp. japonica OX=39947 GN=OSJNBa0016N04.14 PE=3 SV=2 | 1.11E-225 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology